Protein ZmMADS27
ZmMADS27 is a protein in the MADS family.
Information
TF Name: ZmMADS27
Species: Maize
TF Family: MADS
Gene Name(Synonym): MADS27
Uniprot ID: B6T2W5
Subgenome: 1

Protein ZmMADS27

ZmMADS27 is a protein in the MADS family.

Overview of domains present in v5 transcripts
PF00319PF01486PF02383
Zm00001eb078540_T001
Zm00001eb078550_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d003167DAPseq no logo sequence fimo position
Zm00001d003167DAPseq no logo sequence fimo position
Zm00001d003167ChIPseq no logo sequence fimo position
Zm00001d003167PChIPseq no logo sequence fimo position
Zm00001d003168DAPseq no logo sequence fimo position
Zm00001d003168DAPseq no logo sequence fimo position
Zm00001d003168ChIPseq no logo sequence fimo position
Zm00001d003168PChIPseq no logo sequence fimo position
Zm00001d003169DAPseq no logo sequence fimo position
Zm00001d003169DAPseq no logo sequence fimo position
Zm00001d003169ChIPseq no logo sequence fimo position
Zm00001d003169PChIPseq no logo sequence fimo position

Interactions where ZmMADS27 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMADS27 is the target  
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There are 39 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb078540_T001 from maize genome v5

Amino Acid Sequence
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MGRGKVELKKIENPTNRQVTFSKRRMGLFKKANELAILCDAQIGVIIFSGSGRMYEYSSPPWRIASVFDRYLKAPSTRFE
EMDIQQKIVQEMTRMKDERNRLRMIMAQYMAEDLASFSAQDLSNLEQQIEFSLYKVRLRKEMHMPAEQSGYLCLMNPAAA
IASGQHQQAGEMVGINPRPFPWWDVGASGSGSQSQQLLLHGRDAAESSMTALGLSPQMHGYRLQPRQPNLQQDADIHRWL
W

MGRGKVELKKIENPTNRQVTFSKRRMGLFKKANELAILCDAQIGVIIFSGSGRMYEYSSPPWRIASVFDRYLKAPSTRFE
EMDIQQKIVQEMTRMKDERNRLRMIMAQYMAEDLASFSAQDLSNLEQQIEFSLYKVRLRKEMHMPAEQSGYLCLMNPAAA
IASGQHQQAGEMVGINPRPFPWWDVGASGSGSQSQQLLLHGRDAAESSMTALGLSPQMHGYRLQPRQPNLQQDADIHRWL
W

MGRGKVELKKIENPTNRQVTFSKRRMGLFKKANELAILCDAQIGVIIFSGSGRMYEYSSPPWRIASVFDRYLKAPSTRFE
EMDIQQKIVQEMTRMKDERNRLRMIMAQYMAEDLASFSAQDLSNLEQQIEFSLYKVRLRKEMHMPAEQSGYLCLMNPAAA
IASGQHQQAGEMVGINPRPFPWWDVGASGSGSQSQQLLLHGRDAAESSMTALGLSPQMHGYRLQPRQPNLQQDADIHRWL
W

MGRGKVELKKIENPTNRQVTFSKRRMGLFKKANELAILCDAQIGVIIFSGSGRMYEYSSPPWRIASVFDRYLKAPSTRFE
EMDIQQKIVQEMTRMKDERNRLRMIMAQYMAEDLASFSAQDLSNLEQQIEFSLYKVRLRKEMHMPAEQSGYLCLMNPAAA
IASGQHQQAGEMVGINPRPFPWWDVGASGSGSQSQQLLLHGRDAAESSMTALGLSPQMHGYRLQPRQPNLQQDADIHRWL
W

MGRGKVELKKIENPTNRQVTFSKRRMGLFKKANELAILCDAQIGVIIFSGSGRMYEYSSPPWRIASVFDRYLKAPSTRFE
EMDIQQKIVQEMTRMKDERNRLRMIMAQYMAEDLASFSAQDLSNLEQQIEFSLYKVRLRKEMHMPAEQSGYLCLMNPAAA
IASGQHQQAGEMVGINPRPFPWWDVGASGSGSQSQQLLLHGRDAAESSMTALGLSPQMHGYRLQPRQPNLQQDADIHRWL
W

MGRGKVELKKIENPTNRQVTFSKRRMGLFKKANELAILCDAQIGVIIFSGSGRMYEYSSPPWRIASVFDRYLKAPSTRFE
EMDIQQKIVQEMTRMKDERNRLRMIMAQYMAEDLASFSAQDLSNLEQQIEFSLYKVRLRKEMHMPAEQSGYLCLMNPAAA
IASGQHQQAGEMVGINPRPFPWWDVGASGSGSQSQQLLLHGRDAAESSMTALGLSPQMHGYRLQPRQPNLQQDADIHRWL
W

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00319
PF01486
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Nucleotide Sequence
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GTAGAAGCACCAAGCTGTACCAATG...

GRMZM2G134951_T01 from maize genome v3

Amino Acid Sequence
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MEEITGPTQSHHIPRKRGRIRMQRKEIKRGERSSSESSSSLSSESSSSDDEDRGSRKSRSRSSSKRTKQEKKHRSRSKHR
DSESEEGPVRLSKFFGK

Nucleotide Sequence
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GTCTGAAGCCCGCTGAAGAGAGTGC...

GRMZM2G134951_T02 from maize genome v3

Amino Acid Sequence
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KSSEASKWKKSLVQLKVIIFQERSSSESSSSLSSESSSSDDEDRGSRKSRSRSSSKRTKQEKKHRSRSKHRDSESEEGPV
RLSKFFGK

Nucleotide Sequence
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GTCTGAAGCCCGCTGAAGAGAGTGC...

GRMZM2G134951_T03 from maize genome v3

Amino Acid Sequence
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MMREYRAQLDAERAQKLANGRNHWSNSKSSYSKKERKDKDAKKRNKKRRKHRSSSESSSSLSSESSSSDDEDRGSRKSRS
RSSSKRTKQEKKHRSRSKHRDSESEEGPVRLSKFFGK

Nucleotide Sequence
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GTCTGAAGCCCGCTGAAGAGAGTGC...

GRMZM2G134951_T04 from maize genome v3

Amino Acid Sequence
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MGKNQAYKAMQRARLGSSSGAPGAADAPEDGMTDGSFHSPEWHAARLASLNKTHTVTWEEFKKKQKEEELKRGELEADKD
KMMREYRAQLDAERAQKLANGRNHWSNSKSSYSKKERKDKDAKKRNKKRRKHRSSSESSSSLSSESSSSDDEDRGSRKSR
SRSSSKRTKQEKKHRSRSKHRDSESEEGPVRLSKFFGK

Nucleotide Sequence
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CAAAATTCTAGACCAGGAGAAGGAA...

GRMZM2G134951_T05 from maize genome v3

Amino Acid Sequence
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MTDGSFHSPEWHAARLASLNKTHTVTWEEFKKKQKEEELKRGELEADKDKMMREYRAQLDAERAQKLANGRNHWSNSKSS
YSKKERKDKDAKKRNKKRRKHRSSSESSSSLSSESSSSDDEDRGSRKSRSRSSSKRTKQEKKHRSRSKHRDSESEEGPVR
LSKFFGK

Nucleotide Sequence
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GATCTCTGATTGCCATCCGCACTTC...

GRMZM2G134951_T06 from maize genome v3

Amino Acid Sequence
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MMREYRAQLDAERAQKLANGRNHWSNSKSSYSKKERKDKDAKKRNKKRRKHRSSSESSSSLSSESSSSDDEDRGSRKSRS
RSSSKRTKQEKKHRSRSKHRDSESEEGPVRLSKFFGK

Nucleotide Sequence
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GATCTCTGATTGCCATCCGCACTTC...

GRMZM2G134951_T07 from maize genome v3

Amino Acid Sequence
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MEEITGPTQSHHIPRKHRSSSESSSSLSSESSSSDDEDRGSRKSRSRSSSKRTKQEKKHRSRSKHRDSESEEGPVRLSKF
FGK

Nucleotide Sequence
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TTCGATTCACTTTGGACACCTCACC...

GRMZM2G135018_T01 from maize genome v3


Related TFome: pUT4749

Amino Acid Sequence
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MGRGKVELKKIENPTNRQVTFSKRRMGLFKKANELAILCDAQIGVIIFSGSGRMYEYSSPPWRIASVFDRYLKAPSTRFE
EMDIQQKIVQEMTRMKDERNRLRMIMAQYMAEDLASFSAQDLSNLEQQIEFSLYKVRLRKQELLDQQLLEIRQREMHMPA
EQSGYLCLMNPAAAIASGQHQQAGEMVGINPRPFPWWDVGASGSGSQSQQLLLHGRDAAESSMTALGLSPQMHGYRLQPR
QPNLQQDADIHRWLW

Nucleotide Sequence
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ATGGGGCGTGGAAAAGTAGAGCTGA...

Zm00001d003167_T001 from maize genome v4

Amino Acid Sequence
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MGKNQAYKAMQRARLGSSSGAPGAADAPEDGMEEELKRGELEADKDKMMREYRAQLDAERAQKLANGRNHWSNSKSSYSK
KGNGLW

Nucleotide Sequence
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AGTCTGAAGCCCGCTGAAGAGAGTG...

Zm00001d003167_T002 from maize genome v4

Amino Acid Sequence
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MGKNQAYKAMQRARLGSSSGAPGAADAPEDGMVGPSQTDGSFHSPEWHAARLASLNKTHTVTWEEFKKKQKEEELKRGEL
EADKDKMMREYRAQLDAERAQKLANGRNHWSNSKSSYSKKGNGLW

Nucleotide Sequence
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ATGGGGAAGAACCAGGCGTATAAGG...

Zm00001d003168_T001 from maize genome v4

Amino Acid Sequence
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MGRGKVELKKIENPTNRQVTFSKRRMGLFKKANELAILCDAQIGVIIFSGSGRMYEYSSPPWRIASVFDRYLKAPSTRFE
EMDIQQKIVQEMTRMKDERNRLRMIMAQYMAEDLASFSAQDLSNLEQQIEFSLYKVRLRKEMHMPAEQSGYLCLMNPAAA
IASGQHQQAGEMVGINPRPFPWWDVGASGSGSQSQQLLLHGRDAAESSMTALGLSPQMHGYRLQPRQPNLQQDADIHRWL
W

Nucleotide Sequence
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CTAGGCAAAAAACCCGTAACCTCAA...

Zm00001d003169_T001 from maize genome v4

Amino Acid Sequence
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MDLSNLFRRKGTNVLALLSKVASDVLDLTEFLHCEISTSTKFDDISSEEKTVAKSRDDRSSRDQTECAAKLVPLLLQKGV
LRTNCIDCLDRTNVAQFSYGLAALGRQLHALGLAEAHKIELHDPLVDYLMDFYERMGDTLAIQYGGSAAHNKVCLVILAY
SGNVFYIFHY

Nucleotide Sequence
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TTATATTTCAATCAGACCCACGAGA...

Zm00001eb078530_T001 from maize genome v5

Amino Acid Sequence
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MMREYRAQLDAERAQKLANGRNHWSNSKSSYSKKERKDKDAKKRNKKRRKHRSSSESSSSLSSESSSSDDEDRGSRKSRS
RSSSKRTKQEKKHRSRSKHRDSESEEGPVRLSKFFGK

Nucleotide Sequence
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TCCAATCTGGTCTCGCTGGGCCTGG...

Zm00001eb078530_T002 from maize genome v5

Amino Acid Sequence
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MTDGSFHSPEWHAARLASLNKTHTVTWEEFKKKQKEEELKRGELEADKDKMMREYRAQLDAERAQKLANGRNHWSNSKSS
YSKKERKDKDAKKRNKKRRKHRSSSESSSSLSSESSSSDDEDRGSRKSRSRSSSKRTKQEKKHRSRSKHRDSESEEGPVR
LSKFFGK

Nucleotide Sequence
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TCCAATCTGGTCTCGCTGGGCCTGG...

Zm00001eb078530_T003 from maize genome v5

Amino Acid Sequence
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MTDGSFHSPEWHAARLASLNKTHTVTWEEFKKKQKEEELKRGELEADKDKMMREYRAQLDAERAQKLANGRNHWSNSKSS
YSKKEVHQSQVPAYRQNLPAAMMRIGVQGSPDHDLVRREQSRKRSTDQGPSTETVKVRKVQFASLNSSGSKE

Nucleotide Sequence
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TCCAATCTGGTCTCGCTGGGCCTGG...

Zm00001eb078530_T004 from maize genome v5

Amino Acid Sequence
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MMREYRAQLDAERAQKLANGRNHWSNSKSSYSKKERKDKDAKKRNKKRRKHRSSSESSSSLSSESSSSDDEDRGSRKSRS
RSSSKRTKQEKKHRSRSKHRDSESEEGPVRLSKFFGK

Nucleotide Sequence
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TCCAATCTGGTCTCGCTGGGCCTGG...

Zm00001eb078530_T005 from maize genome v5

Amino Acid Sequence
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MTDGSFHSPEWHAARLASLNKTHTVTWEEFKKKQKEEELKRGELEADKDKMMREYRAQLDAERAQKLANGRNHWSNSKSS
YSKKERKDKDAKKRNKKRRKKFIRVKFQLIVRIFQQR

Nucleotide Sequence
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TCCAATCTGGTCTCGCTGGGCCTGG...

Zm00001eb078530_T006 from maize genome v5

Amino Acid Sequence
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MGKNQAYKAMQRARLGSSSGAPGAADAPEDGMTDGSFHSPEWHAARLASLNKTHTVTWEEFKKKQKEEELKRGELEADKD
KMMREYRAQLDAERAQKLANGRNHWSNSKSSYSKKERKDKDAKKRNKKRRKHRSSSESSSSLSSESSSSDDEDRGSRKSR
SRSSSKRTKQEKKHRSRSKHRDSESEEGPVRLSKFFGK

Nucleotide Sequence
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TCCAATCTGGTCTCGCTGGGCCTGG...

Zm00001eb078550_T001 from maize genome v5

Amino Acid Sequence
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MCSSPARPRKKTALIMYFFLCASLLFDMGLSLLENLALRYGNPIIILNLIKTHEKKPRESLLCAEFAKAIHYINKSLSDD
KCLKFLHMDLSNLFRRKGTNVLALLSKVASDVLDLTEFLHCEISTSTKFDDISSEEKTVAKSRDDRSSRDQTECAAKLVP
LLLQKGVLRTNCIDCLDRTNVAQFSYGLAALGRQLHALGLAEAHKIELHDPLVDYLMDFYERMGDTLAIQYGGSAAHNK

Nucleotide Sequence
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TAATATAATCATGTGCAGCTCTCCT...


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